Fly Brain Hubconnectome_interpreter
Yijie Yin, University of Cambridge
A Python library that turns a wiring diagram into testable hypotheses about circuit function, and it runs on a laptop or in Colab even for whole-brain analyses of around 140,000 neurons. It computes polysynaptic effective connectivity between groups of neurons with or without signs, retrieves and plots the actual subcircuit between sources and targets, and exposes a differentiable connectome model. Installable from PyPI, with an accompanying preprint and Colab notebook.
Sources checked
Every fact above was read from these pages on the date the entry was added.
- github.com https://github.com/YijieYin/connectome_interpreter
- biorxiv.org https://www.biorxiv.org/content/10.1101/2025.09.29.679410v2