neuprint-python

Janelia FlyEM (HHMI)

The official Python client for the neuPrint service, letting you pull neuron metadata, connectivity tables and skeletons from Janelia's connectome databases into pandas without writing Cypher by hand. First published on PyPI in January 2020 and still actively released (0.6.3 in July 2026), it is installable via pip, conda or pixi.

Official site ↗

#python-client #neuprint #connectivity-queries #janelia #api

Sources checked

Every fact above was read from these pages on the date the entry was added.

github.com https://github.com/connectome-neuprint/neuprint-python
api.github.com https://api.github.com/repos/connectome-neuprint/neuprint-python
pypi.org https://pypi.org/project/neuprint-python/#history
connectome-neuprint.github.io https://connectome-neuprint.github.io/neuprint-python/docs/quickstart.html
neuprint.janelia.org https://neuprint.janelia.org/api/dbmeta/datasets